AID: a TPP Data Analysis

Analysis of Independent Differences (AID) for analyzing thermal proteome profiling data. For more information, please see Panov, A. & Gygi, S.P. (2019), or online at https://github.com/alex-bio/TPP.
Peptide threshold is inclusive. If you pick 3, then all proteins with 3 or greater peptides are included.
While the ranking of shifted proteins incorporates this value, all proteins are shown in the analysis, regardless of this value.