Peak Width

Mass error (PPM)






Base Peak Chromatogram


Matched MS2 per Second


Comet XCorr

Summed signal-to-noise






MS2 Ion Injection Time

MS3 Ion Injection Time






Precursor Max Intensity

Diff Score






Missed Cleavages

Isolation Specificity






PPM vs. Retention Time

Pulling requested search IDs...




Unfiltered Statistics:

IFI Comparison:

Number of TKO Peptides:



















































Filter Settings:



Protein Choices:

TKO Proteins:

Unchanging Proteins:

This page is for debugging purposes. Contact Joao Paulo (joao_paulo@hms.harvard.edu) or Jeremy Gygi (jeremy.gygi@yale.edu) with questions/issues.